Found Dyadas.
 
Class Dyad Obv_frq No.Genes TotalGenes exp_frq sig ovlaps
INDUCED gaan{15}ccc|gggn{15}ttc 17 15 64 0.00019 0.3 0
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt 10 7 17 0.00022 0.9 0
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca 4 2 2 0.00031 0.6 0
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt 10 7 17 0.00022 0.9 0
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0
Open reading frames accn{4}cag|ctgn{4}ggt 10 7 17 0.00022 0.9 0
Global functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0

DNA Patterns corresponding to Dyadas:
 
Class dyad bnum dirGen name dirSite start end site score BeRegulatedby
INDUCED gaan{15}ccc|gggn{15}ttc b0209 + 1786403_yafD_upstream_-200_0_ecoli_D_230922_231122 D -83 -63 cgttGAAAGAGTGAGCTAAAATCCCtata 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 D -108 -88 cgttGAATGTGGGGGAAACATCCCCatat 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b0473 + 1786679_htpG_upstream_-200_0_ecoli_D_494144_494344 D -77 -57 gcttGAAATTATTCTCCCTTGTCCCcatc 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b0492 - 1786700_ybbN_upstream_-200_0_ecoli_R_517539_517739 D -21 -1 agttGAAGCGCGCGCTTAAGCCCCCa 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b0880 - 1787107_cspD_upstream_-200_0_ecoli_R_921813_922013 D -69 -49 ttttGAACAGCCCCCTCTCTGACCCcggt 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b1594 - 1787878_mlc_upstream_-200_0_ecoli_R_1666588_1666788 D -132 -112 gaggGAAATTTCAGCGAAAAAGCCCgaaa 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b2614 - 1788967_grpE_upstream_-200_0_ecoli_R_2748729_2748929 D -71 -51 ccttGAAACCCTGAAACTGATCCCCataa 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 D -176 -156 tgccGAAGAGCGATCGGGAAGCCCCcgac 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3179 - 1789569_ftsJ_upstream_-200_0_ecoli_R_3325305_3325505 R -106 -86 ggtaGAATGACCCGTTTTCAATCCCaacg 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -62 -42 gcctGAACCCGCAACTGATCACCCCttca 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3498 - 1789913_prlC_upstream_-200_0_ecoli_R_3642812_3643012 D -89 -69 cattGAAATTCACTACACTTAACCCcatg 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3687 - 1790122_ibpA_upstream_-200_0_ecoli_R_3865049_3865249 D -128 -108 gcttGAAAAGTTCATTTCCAGACCCattt 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b3932 - 1790367_hslV_upstream_-200_0_ecoli_R_4119867_4120067 D -94 -74 ggttGAAACCCTCAAAATCCCCCCCatct 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b4141 - 1790584_yjeH_upstream_-200_0_ecoli_R_4367990_4368190 R -190 -170 ccttGAAGGGGCGAAGCCTCATCCCcatt 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b4141 - 1790584_yjeH_upstream_-200_0_ecoli_R_4367990_4368190 R -166 -146 atcaGAATTTTTTTTCTTTTTCCCCcttg 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b4142 + 1790585_mopB_upstream_-200_0_ecoli_D_4368066_4368266 D -130 -110 atcaGAATTTTTTTTCTTTTTCCCCcttg 0.30 .
INDUCED gaan{15}ccc|gggn{15}ttc b4142 + 1790585_mopB_upstream_-200_0_ecoli_D_4368066_4368266 D -106 -86 ccttGAAGGGGCGAAGCCTCATCCCcatt 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.90 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.90 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b0491 + 1786699_ybbM_upstream_-200_0_ecoli_D_515580_515780 DR -87 -78 tatgTGCGCGAGCAaaat 0.60 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b0491 + 1786699_ybbM_upstream_-200_0_ecoli_D_515580_515780 DR -9 0 acacTGCAACCGCActca 0.60 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b1530 + 1787810_marR_upstream_-200_0_ecoli_D_1617001_1617201 DR -108 -99 tactTGCCTGGGCAatat 0.60 MarR
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b1530 + 1787810_marR_upstream_-200_0_ecoli_D_1617001_1617201 DR -73 -64 tactTGCCAGGGCAacta 0.60 MarR
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.90 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.90 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.90 .
Open reading frames accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.90 .
Global functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .