Found Dyadas.
 
Class Dyad Obv_frq No.Genes TotalGenes exp_frq sig ovlaps
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt 10 7 20 0.00022 0.3 0
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca 4 2 2 0.00031 0.6 0
Metabolism of small molecules-Degradation of small molecules-Carbon compounds atcn{14}ccg|cggn{14}gat 4 2 2 0.00018 0.3 0
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration gcgn{5}cgc|gcgn{5}cgc 4 3 3 0.00020 0.6 0
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration cgan{4}cgc|gcgn{4}tcg 4 3 3 0.00013 0.2 0
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg 5 3 5 0.00016 0.2 0
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc 6 5 5 0.00027 0.1 0
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg 7 6 11 0.00018 0.2 0
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt 10 7 20 0.00022 0.3 0
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc 7 7 10 0.00021 0.1 0
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg 7 6 11 0.00018 0.2 0
Open reading frames accn{4}cag|ctgn{4}ggt 10 7 20 0.00022 0.3 0
Global functions acgn{9}aac|gttn{9}cgt 6 5 6 0.00021 0.3 0
Miscellaneous cgan{0}agc|gctn{0}tcg 7 6 11 0.00018 0.2 0

DNA Patterns corresponding to Dyadas:
 
Class dyad bnum dirGen name dirSite start end site score BeRegulatedby
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.30 .
Open reading frames-Unknown proteins, no known homologs-Unknown function accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.30 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b0491 + 1786699_ybbM_upstream_-200_0_ecoli_D_515580_515780 DR -87 -78 tatgTGCGCGAGCAaaat 0.60 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b0491 + 1786699_ybbM_upstream_-200_0_ecoli_D_515580_515780 DR -9 0 acacTGCAACCGCActca 0.60 .
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b1530 + 1787810_marR_upstream_-200_0_ecoli_D_1617001_1617201 DR -108 -99 tactTGCCTGGGCAatat 0.60 MarR
Cell processes-Protection responses-Drug/analog sensitivity tgcn{4}gca|tgcn{4}gca b1530 + 1787810_marR_upstream_-200_0_ecoli_D_1617001_1617201 DR -73 -64 tactTGCCAGGGCAacta 0.60 MarR
Metabolism of small molecules-Degradation of small molecules-Carbon compounds atcn{14}ccg|cggn{14}gat b2297 + 1788635_pta_upstream_-200_0_ecoli_D_2412567_2412767 D -164 -145 tttcATCAACAAAGAAGGTACCCGtcct 0.30 .
Metabolism of small molecules-Degradation of small molecules-Carbon compounds atcn{14}ccg|cggn{14}gat b2297 + 1788635_pta_upstream_-200_0_ecoli_D_2412567_2412767 D -107 -88 ggttATCGCGCAAGACGCGAGCCGcctg 0.30 .
Metabolism of small molecules-Degradation of small molecules-Carbon compounds atcn{14}ccg|cggn{14}gat b2297 + 1788635_pta_upstream_-200_0_ecoli_D_2412567_2412767 R -25 -6 gtttATCCTCTTTCGTTACCGCCGattt 0.30 .
Metabolism of small molecules-Degradation of small molecules-Carbon compounds atcn{14}ccg|cggn{14}gat b4239 - 1790687_treC_upstream_-200_0_ecoli_R_4462283_4462483 D -94 -75 gtttATCTATCAGCGGAAATACCGcctg 0.30 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration gcgn{5}cgc|gcgn{5}cgc b0972 + 1787206_hyaA_upstream_-200_0_ecoli_D_1031162_1031362 DR -143 -133 tctgGCGACGTGCGCcagt 0.60 AppY,ArcA
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration gcgn{5}cgc|gcgn{5}cgc b0977 + 1787211_hyaF_upstream_-200_0_ecoli_D_1035772_1035972 DR -133 -123 tttgGCGTCTTTCGCtttc 0.60 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration gcgn{5}cgc|gcgn{5}cgc b2286 - 1788622_nuoC_upstream_-200_0_ecoli_R_2401877_2402077 DR -185 -175 caggGCGTTTATCGCgcca 0.60 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration gcgn{5}cgc|gcgn{5}cgc b2286 - 1788622_nuoC_upstream_-200_0_ecoli_R_2401877_2402077 DR -143 -133 aagcGCGGTGAACGCattg 0.60 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration cgan{4}cgc|gcgn{4}tcg b0972 + 1787206_hyaA_upstream_-200_0_ecoli_D_1031162_1031362 D -142 -133 ctggCGACGTGCGCcagt 0.20 AppY,ArcA
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration cgan{4}cgc|gcgn{4}tcg b0977 + 1787211_hyaF_upstream_-200_0_ecoli_D_1035772_1035972 R -133 -124 aaagCGAAAGACGCcaaa 0.20 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration cgan{4}cgc|gcgn{4}tcg b2286 - 1788622_nuoC_upstream_-200_0_ecoli_R_2401877_2402077 R -185 -176 ggcgCGATAAACGCcctg 0.20 .
Metabolism of small molecules-Energy metabolism, carbon-Aerobic respiration cgan{4}cgc|gcgn{4}tcg b2286 - 1788622_nuoC_upstream_-200_0_ecoli_R_2401877_2402077 R -90 -81 ttgcCGACAGGCGCaaat 0.20 .
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg b0523 - 1786734_purE_upstream_-200_0_ecoli_R_552323_552523 D -22 -4 tgtgCACCACAGGAGTTTTAAGAcgca 0.20 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg b0523 - 1786734_purE_upstream_-200_0_ecoli_R_552323_552523 R -41 -23 ggtgCACAACTCTCGGCTTTAGAgggc 0.20 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg b1132 - 1787377_ycfC_upstream_-200_0_ecoli_R_1191854_1192054 R -100 -82 gaggCACACTTCACCGTTATAGAagac 0.20 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg b2476 - 1788820_purC_upstream_-200_0_ecoli_R_2595638_2595838 D -55 -37 ccggCACACCAGACAGCAAAAGAtttt 0.20 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Purine ribonucleotide biosynthesis cacn{13}aga|tctn{13}gtg b2476 - 1788820_purC_upstream_-200_0_ecoli_R_2595638_2595838 D -18 0 ttcaCACCCAGGAGTGATAAAGAggaa 0.20 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b0032 + 1786215_carA_upstream_-200_0_ecoli_D_29451_29651 R -160 -142 taatGGCGGGATTTTTTATATTAtttt 0.10 ArgR,IHF
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b0032 + 1786215_carA_upstream_-200_0_ecoli_D_29451_29651 R -139 -121 tatgGGCGCTAAAAGTCAACTTAatgg 0.10 ArgR,IHF
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b0945 + 1787177_pyrD_upstream_-200_0_ecoli_D_1003791_1003991 D -169 -151 gcctGGCGGGCGATAAATGATTAcggc 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b1062 - 1787301_pyrC_upstream_-200_0_ecoli_R_1121830_1122030 D -98 -80 cgagGGCGCATTCGCGCCCTTTAtttt 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b4245 - 2367364_pyrB_upstream_-200_0_ecoli_R_4469969_4470169 R -167 -149 tcccGGCAAATTGTCCGGCATTAtact 0.10 .
Metabolism of small molecules-Nucleotide biosynthesis-Pyrimidine ribonucleotide biosynthesis ggcn{13}tta|taan{13}gcc b4246 - 1790694_pyrL_upstream_-200_0_ecoli_R_4470107_4470307 R -29 -11 tcccGGCAAATTGTCCGGCATTAtact 0.10 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions-Global regulatory functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b0316 - 1786508_yahB_upstream_-200_0_ecoli_R_333657_333857 D -122 -117 taagCGAAGCgacg 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b0880 - 1787107_cspD_upstream_-200_0_ecoli_R_921813_922013 D -6 -1 atgtCGAAGCa 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b2394 + 1788738_yi81_3_upstream_-200_0_ecoli_D_2512145_2512345 R -157 -152 agacCGAAGCgaga 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 D -140 -135 cgccCGAAGCcggg 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 R -189 -184 tggcCGAAGCcgtg 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b4115 - 2367353_yjdE_upstream_-200_0_ecoli_R_4334609_4334809 D -28 -23 gtcaCGAAGCtcgc 0.20 .
Miscellaneous-Some information, but not classifiable-Not classified (included putative assignments) cgan{0}agc|gctn{0}tcg b4141 - 1790584_yjeH_upstream_-200_0_ecoli_R_4367990_4368190 R -182 -177 ggggCGAAGCctca 0.20 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.30 .
Open reading frames-Unknown proteins, no known homologs accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.30 .
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b0523 - 1786734_purE_upstream_-200_0_ecoli_R_552323_552523 D -154 -140 tcacGGCGGATGACGTTGAgctg 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b1062 - 1787301_pyrC_upstream_-200_0_ecoli_R_1121830_1122030 D -160 -146 aactGGCGAAAGGCATTGAagtg 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b1132 - 1787377_ycfC_upstream_-200_0_ecoli_R_1191854_1192054 D -177 -163 tcaaGGCGCTGGACGATGAtcgc 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b2476 - 1788820_purC_upstream_-200_0_ecoli_R_2595638_2595838 D -190 -176 atccGGCCCTTTTTTCTGAtatg 0.10 PurR
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b2500 + 1788846_purN_upstream_-200_0_ecoli_D_2620054_2620254 D -183 -169 aaacGGCAGGTAACGTTGAgcac 0.10 .
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b4245 - 2367364_pyrB_upstream_-200_0_ecoli_R_4469969_4470169 R -199 -185 aagcGGCGCAAGCATTTGAt 0.10 .
Metabolism of small molecules-Nucleotide biosynthesis ggcn{9}tga|tcan{9}gcc b4246 - 1790694_pyrL_upstream_-200_0_ecoli_R_4470107_4470307 R -61 -47 aagcGGCGCAAGCATTTGAtgca 0.10 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions-Global regulatory functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b0316 - 1786508_yahB_upstream_-200_0_ecoli_R_333657_333857 D -122 -117 taagCGAAGCgacg 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b0880 - 1787107_cspD_upstream_-200_0_ecoli_R_921813_922013 D -6 -1 atgtCGAAGCa 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b2394 + 1788738_yi81_3_upstream_-200_0_ecoli_D_2512145_2512345 R -157 -152 agacCGAAGCgaga 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 D -140 -135 cgccCGAAGCcggg 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 R -189 -184 tggcCGAAGCcgtg 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b4115 - 2367353_yjdE_upstream_-200_0_ecoli_R_4334609_4334809 D -28 -23 gtcaCGAAGCtcgc 0.20 .
Miscellaneous-Some information, but not classifiable cgan{0}agc|gctn{0}tcg b4141 - 1790584_yjeH_upstream_-200_0_ecoli_R_4367990_4368190 R -182 -177 ggggCGAAGCctca 0.20 .
Open reading frames accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -181 -172 tcagACCGGAACAGgaga 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b0966 - 1787200_yccV_upstream_-200_0_ecoli_R_1027995_1028195 R -36 -27 gcaaACCCTTTCAGatat 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b1112 + 1787355_ycfR_upstream_-200_0_ecoli_D_1168096_1168296 D -179 -170 gttcACCAGTCCAGatcc 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -148 -139 caacACCAGTGCAGcatc 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b1967 + 1788278_yedU_upstream_-200_0_ecoli_D_2033657_2033857 D -58 -49 agcgACCAGCTCAGtcgc 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b2613 + 1788966_yfjD_upstream_-200_0_ecoli_D_2747198_2747398 R -181 -172 agcaACCAGACCAGcggc 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -149 -140 tcacACCATGCCAGaaaa 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b3280 - 1789674_yrdB_upstream_-200_0_ecoli_R_3427660_3427860 R -63 -54 gaacACCGTGCCAGagaa 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b3399 + 1789802_yrfG_upstream_-200_0_ecoli_D_3526062_3526262 D -46 -37 gatcACCCCTTCAGaaag 0.30 .
Open reading frames accn{4}cag|ctgn{4}ggt b4140 + 1790583_b4140_upstream_-200_0_ecoli_D_4366141_4366341 D -148 -139 cgcaACCCATTCAGgtag 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b0399 + 1786599_phoB_upstream_-200_0_ecoli_D_416166_416366 D -117 -103 cgccACGGAAATCAATAACctga 0.30 PhoB
Global functions acgn{9}aac|gttn{9}cgt b0439 + 1786643_lon_upstream_-200_0_ecoli_D_457912_458112 R -71 -57 cttcACGCCATCTATTAACatgt 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2572 - 1788925_rseA_upstream_-200_0_ecoli_R_2707424_2707624 D -183 -169 atttACGCATGGCAATAACcttg 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 D -96 -82 aaaaACGAGACACTCTAACcctt 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b2573 - 1788926_rpoE_upstream_-200_0_ecoli_R_2708032_2708232 R -46 -32 ttccACGCGCTATCGAAACgcca 0.30 .
Global functions acgn{9}aac|gttn{9}cgt b3067 + 1789448_rpoD_upstream_-200_0_ecoli_D_3210488_3210688 R -83 -69 gttaACGCTGAAATCCAACggtt 0.30 .
Miscellaneous cgan{0}agc|gctn{0}tcg b0316 - 1786508_yahB_upstream_-200_0_ecoli_R_333657_333857 D -122 -117 taagCGAAGCgacg 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b0880 - 1787107_cspD_upstream_-200_0_ecoli_R_921813_922013 D -6 -1 atgtCGAAGCa 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b2394 + 1788738_yi81_3_upstream_-200_0_ecoli_D_2512145_2512345 R -157 -152 agacCGAAGCgaga 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 D -140 -135 cgccCGAAGCcggg 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b3413 + 1789818_yhgH_upstream_-200_0_ecoli_D_3542270_3542470 R -189 -184 tggcCGAAGCcgtg 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b4115 - 2367353_yjdE_upstream_-200_0_ecoli_R_4334609_4334809 D -28 -23 gtcaCGAAGCtcgc 0.20 .
Miscellaneous cgan{0}agc|gctn{0}tcg b4141 - 1790584_yjeH_upstream_-200_0_ecoli_R_4367990_4368190 R -182 -177 ggggCGAAGCctca 0.20 .